Finished projects

Postdoc projects

Dr. Maryam Hemmati

Guest Postdoc

Postdoc Project: A Multi-omics approach: Global Integrated Metabo-Lipid-Prote-omics on the Formation of Cancer in the Absence or Presence of Chronic Inflammation
Guest Postodc (TUM Global Postdoc Fellowship) supervised by Dr. Karin Kleigrewe and Prof.Dr. Corinna Dawid (Chair of Food Chemistry and Molecular Sensory Science)

Master's thesis projects

Master's thesis: Understanding carboxylic acid metabolism in Escherichia coli by dose-resolved proteomics
Finished by Kalina Bamberger
Supervised by Miriam Abele and Dr. Christina Ludwig

Master's thesis: Understanding the effects of abiotic stressors on the Escherichia coli proteome
Finished by Linus Wollenweber
Supervised by Miriam Abele and Dr. Christina Ludwig

Master's thesis: Development of a proteomic screening platform to study bacterial responses to environmental cues.
Finished by Janine Sequeira
Supervised by Miriam Abele and Dr. Christina Ludwig

Master's thesis: Development of LC-MS/MS methods for the detection and quantification of metabolic pathways
Finished by Fabian Scholz
Supervised by Dr. Karin Kleigrewe

Master's thesis: Application of Advanced TX-TL Systems for the assembly of macromolecular protein complexes
Finished by Quirin Emslander
Guest master's student supervised by Prof. Westmeyer, Molecular Imaging, Helmholtz Center Munich and Prof. Simmel, Physics of Synthetic Biological Systems, TUM

Master's thesis: Elucidation of the impact of phosphorylation events on the interactome and cellular localization of the TRAPPII complex
Finished by Miriam Abele
Guest master's student supervised by Prof. Assaad-Gerbert, Chair of Botanik (Prof. Grill), TUM

Master's thesis: Development of a LC-MS/MS-method to detect cyclolinopeptides from linseed in physiological samples (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Susanne Wudy
Master Student of Food Chemistry

Bachelor's thesis projects

Bachelor's thesis: Validation of the melphalan analytical method for physiological samples
Finished by Jennifer Knauer
Supervised by Dr. Karin Kleigrewe

Bachelor's thesis: Validation of the LC-MS/MS method for short-chain fatty acids and organic acids
Finished by Julian Rimann
Supervised by Dr. Karin Kleigrewe

Bachelor's thesis: Extension of the 3-NPH-method for the detection of short-chain fatty acids and other organic acids and aldehydes via LC-MS/MS
Finished by Anna Haderer
Supervised by Dr. Karin Kleigrewe

Bachelor's thesis: Proteomics Profiling of dose-dependent response to DNA and their analogs in Escherichia coli
Finished by Lukas Goelitz
Supervised by Miriam Abele and Dr. Christina Ludwig

Bachelor's thesis: Optimization of a high-throughput bacterial proteomics workflow
Finished by Janine Sequeira
Supervised by Miriam Abele and Dr. Christina Ludwig

Bachelor's thesis: Proteomic characterization of Bacillus cereus and Pseudomonas aeruginosa
Finished by Jessica Böhm
Supervised by Miriam Abele (in collaboration with Prof. Jörg Kleiber, Hochschule Weihenstephan-Triesdorf) 

Bachelor's thesis: Development of a GC-MS metabolomics method for biological samples (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Sophia Paravicini
Bachelor Student Food Chemistry

Bachelor's thesis: Generation of a MS/MS-Data base for Primary Metabolites via High-Resolution Mass Spectrometry (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Nathalie Gelzleichter
Bachelor Student of Food Chemistry

Bachelor's thesis: Identification of flaxseed-biomarkers in physiological samples via LC-MS/MS (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Julius Rami
Bachelor Student of Food Chemistry

Bachelor's thesis: MALDI-Imaging and High-Resolution Tandem Mass Spectrometry of the Ingredients of Vegetable Stew (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Susanne Wudy
Bachelor Student of Food Chemistry

Bachelor's thesis: MALDI-Imaging and High-Resolution Tandem Mass Spectrometry of the Ingredients of Vegetable Stew (in collaboration with Chair of Food Chemistry and Molecular Sensory Science)
Finished by Susanne Wudy
Bachelor Student of Food Chemistry

Internship projects

Internship project: Validation of the LC-MS/MS method for short-chain fatty acids and organic acids
Finished by Julian Rimann
Supervised by Dr. Karin Kleigrewe

Internship project: Validation of the melphalan analytical method for physiological samples
Finished by Jennifer Knauer
Supervised by Dr. Karin Kleigrewe

Internship project: Functions of gut metabolites: a review
Finished by Phuong-Duyen Nguyen
Supervised by Dr. Karin Kleigrewe

Internship project: Evaluation of changes in the lipidome of the immortal keratinocyte cell line HaCat after sulfur mustard exposure using lipidomics mass spectrometry
Finished by Tobias Demel
Supervised by Dr. Karin Kleigrewe

Internship project: Functional proteome analysis: Functionalization of the E. Coli proteome
Finished by Nora Mittag
Supervised by Miriam Abele and Dr. Christina Ludwig

Internship project: microbeMASST: Identification of microbe-derived metabolites by different untargeted metabolomics approaches
Finished by Christoph Muetherig
Supervised by Dr. Karin Kleigrewe

Internship project: Functionalization of the E.coli proteome
Finished by Paul Menden
Supervised by Miriam Abele and Dr. Christina Ludwig

Internship project: The development of an LC-MS-HILIC method for the detection of sugar phosphates
Finished by Luana Meenenga
Supervised by Dr. Karin Kleigrewe

Internship project: Arabidopsis thaliana leaf and apoplastic wash fluid proteomics and peptidomics
Finished by Ovi Mahesh Dixit
Supervised by Genc Haljiti and Dr. Christina Ludwig

Internship project: Development of a GC-MS method for the detection of free fatty acids in biological samples
Finished by Moritz Buescher
Supervised by Dr. Karin Kleigrewe

Internship project: Education on the new method of targeted metabolomics for LC-MS system
Finished by Ivana Rubic
Supervised by Dr. Karin Kleigrewe

Internship project: Measuring the free amino acid pool on Escherichia coli with an optimized metabolomics protocol
Finished by Pierre Haftstein
Supervised by Miriam Abele and Dr. Christina Ludwig

Internship project: Untargeted and targeted mass spectrometric analysis of blood platelets
Finished by Anthony Tanios
Supervised by Dr. Karin Kleigrewe

Internship project: Evaluation of bacterial sample preparation methods for bottom-up proteomics
Finished by Maike Zürn
Supervised by Miriam Abele and Dr. Christina Ludwig

Internship project: Functional annotation of metabolites in an untargeted metabolomics experiment
Finished by Jingya Wang
Supervised by Dr. Chen Meng

Internship project: Refinements in the methodology of a proteomic screening platform for the study of bacterial responses to environmental cues
Finished by Linus Wollenweber
Supervised by Miriam Abele and Dr. Christina Ludwig

Internship project: Improving metabolite annotation using SIRIUS 4 in untargeted metabolomics data
Finished by Chenrui Xie
Supervised by Dr. Chen Meng

Internship project: Proteomic characterization of closely and distantly related strains of the genus Pseudomonas
Finished by  Salih Özer
Supervised by Miriam Abele (in cooperation with the Chair of Proteomics and Bioanalytics) 

Internship project: Influence of sampling methods on the stool metabolome
Finished by William Judt
Bachelor Student Bioanalytics from Hochschule Coburg
Supervised by Dr. Karin Kleigrewe

Internship project: An omics study on mechanisms of Lactobacillus brevis aggregation (in collaboration with Chair of Technical Microbiology)
Finished by Thomas Krieger
Student Intern Biology